Most efficient way to get file system [duplicate] - php

I have to build a tree that will contain about 300 nodes inside it. The tree has no depth limitations. So it can have 3 or 15 levels. Each node can have an unlimited number of children.
The priority is to get a complete tree / subtree the faster as possible, but I also need to add nodes or move nodes sometimes but not that often.
I want to know the best way to store the tree in the database and the best way to retrieve the data, if possible, in php.

You can use a Nested Set Model as it yields very efficient queries. Check out Managing Hierarchical Data in MySQL and read the section called Nested Set Model.
If you're using an ORM like Doctrine, it includes nested set capabilities.
It can be difficult for some to grasp the nested set concepts of left and right. I have found that using those numbers as an analogy for the line numbers of open/close tags in an XML document, folks find it easier to grasp.
For instance, take the data example from the MySQL link above:
+-------------+----------------------+-----+-----+
| category_id | name | lft | rgt |
+-------------+----------------------+-----+-----+
| 1 | ELECTRONICS | 1 | 20 |
| 2 | TELEVISIONS | 2 | 9 |
| 3 | TUBE | 3 | 4 |
| 4 | LCD | 5 | 6 |
| 5 | PLASMA | 7 | 8 |
| 6 | PORTABLE ELECTRONICS | 10 | 19 |
| 7 | MP3 PLAYERS | 11 | 14 |
| 8 | FLASH | 12 | 13 |
| 9 | CD PLAYERS | 15 | 16 |
| 10 | 2 WAY RADIOS | 17 | 18 |
+-------------+----------------------+-----+-----+
If you take the lft, rgt fields and use them as line numbers for an XML document, you get:
1. <electronics>
2. <televisions>
3. <tube>
4. </tube>
5. <lcd>
6. </lcd>
7. <plasma>
8. </plasma>
9. </televisions>
10. <portable electronics>
11. <mp3 players>
12. <flash>
13. </flash>
14. </mp3 players>
15. <cd players>
16. </cd players>
17. <2 way radios>
18. </2 way radios>
19. </portable electronics>
20. </electronics>
Seeing it this way can make it much easier for some to visualize the resulting nested set hierarchy. It also makes it clearer why this approach improves efficiency as it makes it possible to select entire nodes without the need for multiple queries or joins.

This is great article about it: Managing Hierarchical Data in MySQL. I used for a long time.
If you have some mathematical capabilities, you can really understand why it is so great!

<?php
$host = "localhost";
//Database user name.
$login = "root";
//Database Password.
$dbpass = "";
$dbname = "abc";
$PDO = new PDO("mysql:host=localhost;dbname=$dbname", "$login", "$dbpass");
$rows = array();
$sql = 'SELECT id, parent_id, name FROM employee';
$query = $PDO->prepare($sql);
$query->execute();
$rows = array();
if (!$query)
{
$error = 'Error fetching page structure, for nav menu generation.';
exit();
}
while($row = $query->fetch(PDO::FETCH_ASSOC)){
if( strcasecmp($row['parent_id'],'null') === 0 || empty($row['parent_id']) ) {
$row['parent_id'] = null;
}
$rows[] = $row;
}
// covert raw result set to tree
$menu = convertAdjacencyListToTree(null,$rows,'id','parent_id','links');
// echo '<pre>',print_r($menu),'</pre>';
// display menu
echo themeMenu($menu,1);
/*
* ------------------------------------------------------------------------------------
* Utility functions
* ------------------------------------------------------------------------------------
*/
/*
* Convert adjacency list to hierarchical tree
*
* #param value of root level parent most likely null or 0
* #param array result
* #param str name of primary key column
* #param str name of parent_id column - most likely parent_id
* #param str name of index that children will reside ie. children, etc
* #return array tree
*/
function convertAdjacencyListToTree($intParentId,&$arrRows,$strIdField,$strParentsIdField,$strNameResolution) {
$arrChildren = array();
for($i=0;$i<count($arrRows);$i++) {
if($intParentId === $arrRows[$i][$strParentsIdField]) {
$arrChildren = array_merge($arrChildren,array_splice($arrRows,$i--,1));
}
}
$intChildren = count($arrChildren);
if($intChildren != 0) {
for($i=0;$i<$intChildren;$i++) {
$arrChildren[$i][$strNameResolution] = convertAdjacencyListToTree($arrChildren[$i][$strIdField],$arrRows,$strIdField,$strParentsIdField,$strNameResolution);
}
}
return $arrChildren;
}
/*
* Theme menu
*
* #param array menu
* #param runner (depth)
* #return str themed menu
*/
function themeMenu($menu,$runner) {
$out = '';
if(empty($menu)) {
return $out;
}
$out.='<ul>';
foreach($menu as $link) {
$out.= sprintf(
'<li class="depth-%u">%s%s</li>'
,$runner
,$link['name']
,themeMenu($link['links'],($runner+1))
);
}
$out.='</ul>';
return $out;
}
?>

Related

MySQL PHP select where "X,Y" is in X,Y,Z

How do I complete this code below? I am trying to select news from the database and the locations which can be 23,22,88,90 location codes. I know you can just do IN('23', '22', '88', '90') but the problem is, my locations are a string so it comes out like IN('23,22,88,90') I believe.
How do I expand on the string of locations and select all or any including the locations in the string? So in the database, newsLocations could be 22 23 22,90 23,80,90 90. If that makes sense? so if $locationstoGet has 22,88,90 only, it will get the newsLocation even if the result is just 88,90 without the 22.
$locationsToGet = '22,88';
$db->query("SELECT * FROM news WHERE newsLocation IN($locationstoGet)");
I hope I explained this alright.
I saw a response on another site here
So I will adapt the solution there to your scenario. Change locationsToGet into an array, and use the implode function to generate the right syntax for the IN Clause.
$locationsToGetArr = array('22','88');
$locations = "'".implode("','",$locationsToGetArr)."'"; //this should output '22','88'
$db->query("SELECT * FROM news WHERE newsLocation IN($locations)");
This solution is assuming your database structure is as such
+--------+--------------+
| news | newsLocation |
+--------+--------------+
| 1 | 88 |
| 1 | 22 |
| 2 | 22 |
| 2 | 88 |
+--------+--------------+
But if you are storing your data as the following instead
+--------+--------------+
| news | newsLocation |
+--------+--------------+
| 1 | 88,22 |
| 2 | 22,88 |
+--------+--------------+
You will not have much choice besides to select all from news table and have PHP filter the location. Not a very efficient method.
If your data is comma separated stored in databse column then you can use MYSQL FIND IN SET as per below example.
SELECT FIND_IN_SET('b','a,b,c,d');
OR you can try with regular expression in MYSQL but it will be too slow.
You can make an array of your locations and then populate your query string with the items from the array
$locations = '22,88';
$locationsToGetArray = explode(",", $locationToGet)
$query = "SELECT * FROM news WHERE newsLocation IN(";
for ($i = 0; $i < count($locationsToGetArray); $i++) {
$query .= $locationsToGetArray[$i];
if($i == (count($locationToGetArray) - 1)) $query.= ")";
else $query .= ",";
}
$db->query($query);

Mysql - order tree [duplicate]

Assume you have a flat table that stores an ordered tree hierarchy:
Id Name ParentId Order
1 'Node 1' 0 10
2 'Node 1.1' 1 10
3 'Node 2' 0 20
4 'Node 1.1.1' 2 10
5 'Node 2.1' 3 10
6 'Node 1.2' 1 20
Here's a diagram, where we have [id] Name. Root node 0 is fictional.
[0] ROOT
/ \
[1] Node 1 [3] Node 2
/ \ \
[2] Node 1.1 [6] Node 1.2 [5] Node 2.1
/
[4] Node 1.1.1
What minimalistic approach would you use to output that to HTML (or text, for that matter) as a correctly ordered, correctly indented tree?
Assume further you only have basic data structures (arrays and hashmaps), no fancy objects with parent/children references, no ORM, no framework, just your two hands. The table is represented as a result set, which can be accessed randomly.
Pseudo code or plain English is okay, this is purely a conceptional question.
Bonus question: Is there a fundamentally better way to store a tree structure like this in a RDBMS?
EDITS AND ADDITIONS
To answer one commenter's (Mark Bessey's) question: A root node is not necessary, because it is never going to be displayed anyway. ParentId = 0 is the convention to express "these are top level". The Order column defines how nodes with the same parent are going to be sorted.
The "result set" I spoke of can be pictured as an array of hashmaps (to stay in that terminology). For my example was meant to be already there. Some answers go the extra mile and construct it first, but thats okay.
The tree can be arbitrarily deep. Each node can have N children. I did not exactly have a "millions of entries" tree in mind, though.
Don't mistake my choice of node naming ('Node 1.1.1') for something to rely on. The nodes could equally well be called 'Frank' or 'Bob', no naming structure is implied, this was merely to make it readable.
I have posted my own solution so you guys can pull it to pieces.
Now that MySQL 8.0 supports recursive queries, we can say that all popular SQL databases support recursive queries in standard syntax.
WITH RECURSIVE MyTree AS (
SELECT * FROM MyTable WHERE ParentId IS NULL
UNION ALL
SELECT m.* FROM MyTABLE AS m JOIN MyTree AS t ON m.ParentId = t.Id
)
SELECT * FROM MyTree;
I tested recursive queries in MySQL 8.0 in my presentation Recursive Query Throwdown in 2017.
Below is my original answer from 2008:
There are several ways to store tree-structured data in a relational database. What you show in your example uses two methods:
Adjacency List (the "parent" column) and
Path Enumeration (the dotted-numbers in your name column).
Another solution is called Nested Sets, and it can be stored in the same table too. Read "Trees and Hierarchies in SQL for Smarties" by Joe Celko for a lot more information on these designs.
I usually prefer a design called Closure Table (aka "Adjacency Relation") for storing tree-structured data. It requires another table, but then querying trees is pretty easy.
I cover Closure Table in my presentation Models for Hierarchical Data with SQL and PHP and in my book SQL Antipatterns Volume 1: Avoiding the Pitfalls of Database Programming.
CREATE TABLE ClosureTable (
ancestor_id INT NOT NULL REFERENCES FlatTable(id),
descendant_id INT NOT NULL REFERENCES FlatTable(id),
PRIMARY KEY (ancestor_id, descendant_id)
);
Store all paths in the Closure Table, where there is a direct ancestry from one node to another. Include a row for each node to reference itself. For example, using the data set you showed in your question:
INSERT INTO ClosureTable (ancestor_id, descendant_id) VALUES
(1,1), (1,2), (1,4), (1,6),
(2,2), (2,4),
(3,3), (3,5),
(4,4),
(5,5),
(6,6);
Now you can get a tree starting at node 1 like this:
SELECT f.*
FROM FlatTable f
JOIN ClosureTable a ON (f.id = a.descendant_id)
WHERE a.ancestor_id = 1;
The output (in MySQL client) looks like the following:
+----+
| id |
+----+
| 1 |
| 2 |
| 4 |
| 6 |
+----+
In other words, nodes 3 and 5 are excluded, because they're part of a separate hierarchy, not descending from node 1.
Re: comment from e-satis about immediate children (or immediate parent). You can add a "path_length" column to the ClosureTable to make it easier to query specifically for an immediate child or parent (or any other distance).
INSERT INTO ClosureTable (ancestor_id, descendant_id, path_length) VALUES
(1,1,0), (1,2,1), (1,4,2), (1,6,1),
(2,2,0), (2,4,1),
(3,3,0), (3,5,1),
(4,4,0),
(5,5,0),
(6,6,0);
Then you can add a term in your search for querying the immediate children of a given node. These are descendants whose path_length is 1.
SELECT f.*
FROM FlatTable f
JOIN ClosureTable a ON (f.id = a.descendant_id)
WHERE a.ancestor_id = 1
AND path_length = 1;
+----+
| id |
+----+
| 2 |
| 6 |
+----+
Re comment from #ashraf: "How about sorting the whole tree [by name]?"
Here's an example query to return all nodes that are descendants of node 1, join them to the FlatTable that contains other node attributes such as name, and sort by the name.
SELECT f.name
FROM FlatTable f
JOIN ClosureTable a ON (f.id = a.descendant_id)
WHERE a.ancestor_id = 1
ORDER BY f.name;
Re comment from #Nate:
SELECT f.name, GROUP_CONCAT(b.ancestor_id order by b.path_length desc) AS breadcrumbs
FROM FlatTable f
JOIN ClosureTable a ON (f.id = a.descendant_id)
JOIN ClosureTable b ON (b.descendant_id = a.descendant_id)
WHERE a.ancestor_id = 1
GROUP BY a.descendant_id
ORDER BY f.name
+------------+-------------+
| name | breadcrumbs |
+------------+-------------+
| Node 1 | 1 |
| Node 1.1 | 1,2 |
| Node 1.1.1 | 1,2,4 |
| Node 1.2 | 1,6 |
+------------+-------------+
A user suggested an edit today. SO moderators approved the edit, but I am reversing it.
The edit suggested that the ORDER BY in the last query above should be ORDER BY b.path_length, f.name, presumably to make sure the ordering matches the hierarchy. But this doesn't work, because it would order "Node 1.1.1" after "Node 1.2".
If you want the ordering to match the hierarchy in a sensible way, that is possible, but not simply by ordering by the path length. For example, see my answer to MySQL Closure Table hierarchical database - How to pull information out in the correct order.
If you use nested sets (sometimes referred to as Modified Pre-order Tree Traversal) you can extract the entire tree structure or any subtree within it in tree order with a single query, at the cost of inserts being more expensive, as you need to manage columns which describe an in-order path through thee tree structure.
For django-mptt, I used a structure like this:
id parent_id tree_id level lft rght
-- --------- ------- ----- --- ----
1 null 1 0 1 14
2 1 1 1 2 7
3 2 1 2 3 4
4 2 1 2 5 6
5 1 1 1 8 13
6 5 1 2 9 10
7 5 1 2 11 12
Which describes a tree which looks like this (with id representing each item):
1
+-- 2
| +-- 3
| +-- 4
|
+-- 5
+-- 6
+-- 7
Or, as a nested set diagram which makes it more obvious how the lft and rght values work:
__________________________________________________________________________
| Root 1 |
| ________________________________ ________________________________ |
| | Child 1.1 | | Child 1.2 | |
| | ___________ ___________ | | ___________ ___________ | |
| | | C 1.1.1 | | C 1.1.2 | | | | C 1.2.1 | | C 1.2.2 | | |
1 2 3___________4 5___________6 7 8 9___________10 11__________12 13 14
| |________________________________| |________________________________| |
|__________________________________________________________________________|
As you can see, to get the entire subtree for a given node, in tree order, you simply have to select all rows which have lft and rght values between its lft and rght values. It's also simple to retrieve the tree of ancestors for a given node.
The level column is a bit of denormalisation for convenience more than anything and the tree_id column allows you to restart the lft and rght numbering for each top-level node, which reduces the number of columns affected by inserts, moves and deletions, as the lft and rght columns have to be adjusted accordingly when these operations take place in order to create or close gaps. I made some development notes at the time when I was trying to wrap my head around the queries required for each operation.
In terms of actually working with this data to display a tree, I created a tree_item_iterator utility function which, for each node, should give you sufficient information to generate whatever kind of display you want.
More info about MPTT:
Trees in SQL
Storing Hierarchical Data in a Database
Managing Hierarchical Data in MySQL
It's a quite old question, but as it's got many views I think it's worth to present an alternative, and in my opinion very elegant, solution.
In order to read a tree structure you can use recursive Common Table Expressions (CTEs). It gives a possibility to fetch whole tree structure at once, have the information about the level of the node, its parent node and order within children of the parent node.
Let me show you how this would work in PostgreSQL 9.1.
Create a structure
CREATE TABLE tree (
id int NOT NULL,
name varchar(32) NOT NULL,
parent_id int NULL,
node_order int NOT NULL,
CONSTRAINT tree_pk PRIMARY KEY (id),
CONSTRAINT tree_tree_fk FOREIGN KEY (parent_id)
REFERENCES tree (id) NOT DEFERRABLE
);
insert into tree values
(0, 'ROOT', NULL, 0),
(1, 'Node 1', 0, 10),
(2, 'Node 1.1', 1, 10),
(3, 'Node 2', 0, 20),
(4, 'Node 1.1.1', 2, 10),
(5, 'Node 2.1', 3, 10),
(6, 'Node 1.2', 1, 20);
Write a query
WITH RECURSIVE
tree_search (id, name, level, parent_id, node_order) AS (
SELECT
id,
name,
0,
parent_id,
1
FROM tree
WHERE parent_id is NULL
UNION ALL
SELECT
t.id,
t.name,
ts.level + 1,
ts.id,
t.node_order
FROM tree t, tree_search ts
WHERE t.parent_id = ts.id
)
SELECT * FROM tree_search
WHERE level > 0
ORDER BY level, parent_id, node_order;
Here are the results:
id | name | level | parent_id | node_order
----+------------+-------+-----------+------------
1 | Node 1 | 1 | 0 | 10
3 | Node 2 | 1 | 0 | 20
2 | Node 1.1 | 2 | 1 | 10
6 | Node 1.2 | 2 | 1 | 20
5 | Node 2.1 | 2 | 3 | 10
4 | Node 1.1.1 | 3 | 2 | 10
(6 rows)
The tree nodes are ordered by a level of depth. In the final output we would present them in the subsequent lines.
For each level, they are ordered by parent_id and node_order within the parent. This tells us how to present them in the output - link node to the parent in this order.
Having such a structure it wouldn't be difficult to make a really nice presentation in HTML.
Recursive CTEs are available in PostgreSQL, IBM DB2, MS SQL Server, Oracle and SQLite.
If you'd like to read more on recursive SQL queries, you can either check the documentation of your favourite DBMS or read my two articles covering this topic:
Do It In SQL: Recursive Tree Traversal
Get to know the power of SQL recursive queries
As of Oracle 9i, you can use CONNECT BY.
SELECT LPAD(' ', (LEVEL - 1) * 4) || "Name" AS "Name"
FROM (SELECT * FROM TMP_NODE ORDER BY "Order")
CONNECT BY PRIOR "Id" = "ParentId"
START WITH "Id" IN (SELECT "Id" FROM TMP_NODE WHERE "ParentId" = 0)
As of SQL Server 2005, you can use a recursive common table expression (CTE).
WITH [NodeList] (
[Id]
, [ParentId]
, [Level]
, [Order]
) AS (
SELECT [Node].[Id]
, [Node].[ParentId]
, 0 AS [Level]
, CONVERT([varchar](MAX), [Node].[Order]) AS [Order]
FROM [Node]
WHERE [Node].[ParentId] = 0
UNION ALL
SELECT [Node].[Id]
, [Node].[ParentId]
, [NodeList].[Level] + 1 AS [Level]
, [NodeList].[Order] + '|'
+ CONVERT([varchar](MAX), [Node].[Order]) AS [Order]
FROM [Node]
INNER JOIN [NodeList] ON [NodeList].[Id] = [Node].[ParentId]
) SELECT REPLICATE(' ', [NodeList].[Level] * 4) + [Node].[Name] AS [Name]
FROM [Node]
INNER JOIN [NodeList] ON [NodeList].[Id] = [Node].[Id]
ORDER BY [NodeList].[Order]
Both will output the following results.
Name
'Node 1'
' Node 1.1'
' Node 1.1.1'
' Node 1.2'
'Node 2'
' Node 2.1'
Bill's answer is pretty gosh-darned good, this answer adds some things to it which makes me wish SO supported threaded answers.
Anyway I wanted to support the tree structure and the Order property. I included a single property in each Node called leftSibling that does the same thing Order is meant to do in the original question (maintain left-to-right order).
mysql> desc nodes ;
+-------------+--------------+------+-----+---------+----------------+
| Field | Type | Null | Key | Default | Extra |
+-------------+--------------+------+-----+---------+----------------+
| id | int(11) | NO | PRI | NULL | auto_increment |
| name | varchar(255) | YES | | NULL | |
| leftSibling | int(11) | NO | | 0 | |
+-------------+--------------+------+-----+---------+----------------+
3 rows in set (0.00 sec)
mysql> desc adjacencies;
+------------+---------+------+-----+---------+----------------+
| Field | Type | Null | Key | Default | Extra |
+------------+---------+------+-----+---------+----------------+
| relationId | int(11) | NO | PRI | NULL | auto_increment |
| parent | int(11) | NO | | NULL | |
| child | int(11) | NO | | NULL | |
| pathLen | int(11) | NO | | NULL | |
+------------+---------+------+-----+---------+----------------+
4 rows in set (0.00 sec)
More detail and SQL code on my blog.
Thanks Bill your answer was helpful in getting started!
There are really good solutions which exploit the internal btree representation of sql indices. This is based on some great research done back around 1998.
Here is an example table (in mysql).
CREATE TABLE `node` (
`id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`name` varchar(255) NOT NULL,
`tw` int(10) unsigned NOT NULL,
`pa` int(10) unsigned DEFAULT NULL,
`sz` int(10) unsigned DEFAULT NULL,
`nc` int(11) GENERATED ALWAYS AS (tw+sz) STORED,
PRIMARY KEY (`id`),
KEY `node_tw_index` (`tw`),
KEY `node_pa_index` (`pa`),
KEY `node_nc_index` (`nc`),
CONSTRAINT `node_pa_fk` FOREIGN KEY (`pa`) REFERENCES `node` (`tw`) ON DELETE CASCADE
)
The only fields necessary for the tree representation are:
tw: The Left to Right DFS Pre-order index, where root = 1.
pa: The reference (using tw) to the parent node, root has null.
sz: The size of the node's branch including itself.
nc: is used as syntactic sugar. it is tw+sz and represents the tw of the node's "next child".
Here is an example 24 node population, ordered by tw:
+-----+---------+----+------+------+------+
| id | name | tw | pa | sz | nc |
+-----+---------+----+------+------+------+
| 1 | Root | 1 | NULL | 24 | 25 |
| 2 | A | 2 | 1 | 14 | 16 |
| 3 | AA | 3 | 2 | 1 | 4 |
| 4 | AB | 4 | 2 | 7 | 11 |
| 5 | ABA | 5 | 4 | 1 | 6 |
| 6 | ABB | 6 | 4 | 3 | 9 |
| 7 | ABBA | 7 | 6 | 1 | 8 |
| 8 | ABBB | 8 | 6 | 1 | 9 |
| 9 | ABC | 9 | 4 | 2 | 11 |
| 10 | ABCD | 10 | 9 | 1 | 11 |
| 11 | AC | 11 | 2 | 4 | 15 |
| 12 | ACA | 12 | 11 | 2 | 14 |
| 13 | ACAA | 13 | 12 | 1 | 14 |
| 14 | ACB | 14 | 11 | 1 | 15 |
| 15 | AD | 15 | 2 | 1 | 16 |
| 16 | B | 16 | 1 | 1 | 17 |
| 17 | C | 17 | 1 | 6 | 23 |
| 359 | C0 | 18 | 17 | 5 | 23 |
| 360 | C1 | 19 | 18 | 4 | 23 |
| 361 | C2(res) | 20 | 19 | 3 | 23 |
| 362 | C3 | 21 | 20 | 2 | 23 |
| 363 | C4 | 22 | 21 | 1 | 23 |
| 18 | D | 23 | 1 | 1 | 24 |
| 19 | E | 24 | 1 | 1 | 25 |
+-----+---------+----+------+------+------+
Every tree result can be done non-recursively.
For instance, to get a list of ancestors of node at tw='22'
Ancestors
select anc.* from node me,node anc
where me.tw=22 and anc.nc >= me.tw and anc.tw <= me.tw
order by anc.tw;
+-----+---------+----+------+------+------+
| id | name | tw | pa | sz | nc |
+-----+---------+----+------+------+------+
| 1 | Root | 1 | NULL | 24 | 25 |
| 17 | C | 17 | 1 | 6 | 23 |
| 359 | C0 | 18 | 17 | 5 | 23 |
| 360 | C1 | 19 | 18 | 4 | 23 |
| 361 | C2(res) | 20 | 19 | 3 | 23 |
| 362 | C3 | 21 | 20 | 2 | 23 |
| 363 | C4 | 22 | 21 | 1 | 23 |
+-----+---------+----+------+------+------+
Siblings and children are trivial - just use pa field ordering by tw.
Descendants
For example the set (branch) of nodes that are rooted at tw = 17.
select des.* from node me,node des
where me.tw=17 and des.tw < me.nc and des.tw >= me.tw
order by des.tw;
+-----+---------+----+------+------+------+
| id | name | tw | pa | sz | nc |
+-----+---------+----+------+------+------+
| 17 | C | 17 | 1 | 6 | 23 |
| 359 | C0 | 18 | 17 | 5 | 23 |
| 360 | C1 | 19 | 18 | 4 | 23 |
| 361 | C2(res) | 20 | 19 | 3 | 23 |
| 362 | C3 | 21 | 20 | 2 | 23 |
| 363 | C4 | 22 | 21 | 1 | 23 |
+-----+---------+----+------+------+------+
Additional Notes
This methodology is extremely useful for when there are a far greater number of reads than there are inserts or updates.
Because the insertion, movement, or updating of a node in the tree requires the tree to be adjusted, it is necessary to lock the table before commencing with the action.
The insertion/deletion cost is high because the tw index and sz (branch size) values will need to be updated on all the nodes after the insertion point, and for all ancestors respectively.
Branch moving involves moving the tw value of the branch out of range, so it is also necessary to disable foreign key constraints when moving a branch. There are, essentially four queries required to move a branch:
Move the branch out of range.
Close the gap that it left. (the remaining tree is now normalised).
Open the gap where it will go to.
Move the branch into it's new position.
Adjust Tree Queries
The opening/closing of gaps in the tree is an important sub-function used by create/update/delete methods, so I include it here.
We need two parameters - a flag representing whether or not we are downsizing or upsizing, and the node's tw index. So, for example tw=18 (which has a branch size of 5). Let's assume that we are downsizing (removing tw) - this means that we are using '-' instead of '+' in the updates of the following example.
We first use a (slightly altered) ancestor function to update the sz value.
update node me, node anc set anc.sz = anc.sz - me.sz from
node me, node anc where me.tw=18
and ((anc.nc >= me.tw and anc.tw < me.pa) or (anc.tw=me.pa));
Then we need to adjust the tw for those whose tw is higher than the branch to be removed.
update node me, node anc set anc.tw = anc.tw - me.sz from
node me, node anc where me.tw=18 and anc.tw >= me.tw;
Then we need to adjust the parent for those whose pa's tw is higher than the branch to be removed.
update node me, node anc set anc.pa = anc.pa - me.sz from
node me, node anc where me.tw=18 and anc.pa >= me.tw;
Well given the choice, I'd be using objects. I'd create an object for each record where each object has a children collection and store them all in an assoc array (/hashtable) where the Id is the key. And blitz through the collection once, adding the children to the relevant children fields. Simple.
But because you're being no fun by restricting use of some good OOP, I'd probably iterate based on:
function PrintLine(int pID, int level)
foreach record where ParentID == pID
print level*tabs + record-data
PrintLine(record.ID, level + 1)
PrintLine(0, 0)
Edit: this is similar to a couple of other entries, but I think it's slightly cleaner. One thing I'll add: this is extremely SQL-intensive. It's nasty. If you have the choice, go the OOP route.
This was written quickly, and is neither pretty nor efficient (plus it autoboxes alot, converting between int and Integer is annoying!), but it works.
It probably breaks the rules since I'm creating my own objects but hey I'm doing this as a diversion from real work :)
This also assumes that the resultSet/table is completely read into some sort of structure before you start building Nodes, which wouldn't be the best solution if you have hundreds of thousands of rows.
public class Node {
private Node parent = null;
private List<Node> children;
private String name;
private int id = -1;
public Node(Node parent, int id, String name) {
this.parent = parent;
this.children = new ArrayList<Node>();
this.name = name;
this.id = id;
}
public int getId() {
return this.id;
}
public String getName() {
return this.name;
}
public void addChild(Node child) {
children.add(child);
}
public List<Node> getChildren() {
return children;
}
public boolean isRoot() {
return (this.parent == null);
}
#Override
public String toString() {
return "id=" + id + ", name=" + name + ", parent=" + parent;
}
}
public class NodeBuilder {
public static Node build(List<Map<String, String>> input) {
// maps id of a node to it's Node object
Map<Integer, Node> nodeMap = new HashMap<Integer, Node>();
// maps id of a node to the id of it's parent
Map<Integer, Integer> childParentMap = new HashMap<Integer, Integer>();
// create special 'root' Node with id=0
Node root = new Node(null, 0, "root");
nodeMap.put(root.getId(), root);
// iterate thru the input
for (Map<String, String> map : input) {
// expect each Map to have keys for "id", "name", "parent" ... a
// real implementation would read from a SQL object or resultset
int id = Integer.parseInt(map.get("id"));
String name = map.get("name");
int parent = Integer.parseInt(map.get("parent"));
Node node = new Node(null, id, name);
nodeMap.put(id, node);
childParentMap.put(id, parent);
}
// now that each Node is created, setup the child-parent relationships
for (Map.Entry<Integer, Integer> entry : childParentMap.entrySet()) {
int nodeId = entry.getKey();
int parentId = entry.getValue();
Node child = nodeMap.get(nodeId);
Node parent = nodeMap.get(parentId);
parent.addChild(child);
}
return root;
}
}
public class NodePrinter {
static void printRootNode(Node root) {
printNodes(root, 0);
}
static void printNodes(Node node, int indentLevel) {
printNode(node, indentLevel);
// recurse
for (Node child : node.getChildren()) {
printNodes(child, indentLevel + 1);
}
}
static void printNode(Node node, int indentLevel) {
StringBuilder sb = new StringBuilder();
for (int i = 0; i < indentLevel; i++) {
sb.append("\t");
}
sb.append(node);
System.out.println(sb.toString());
}
public static void main(String[] args) {
// setup dummy data
List<Map<String, String>> resultSet = new ArrayList<Map<String, String>>();
resultSet.add(newMap("1", "Node 1", "0"));
resultSet.add(newMap("2", "Node 1.1", "1"));
resultSet.add(newMap("3", "Node 2", "0"));
resultSet.add(newMap("4", "Node 1.1.1", "2"));
resultSet.add(newMap("5", "Node 2.1", "3"));
resultSet.add(newMap("6", "Node 1.2", "1"));
Node root = NodeBuilder.build(resultSet);
printRootNode(root);
}
//convenience method for creating our dummy data
private static Map<String, String> newMap(String id, String name, String parentId) {
Map<String, String> row = new HashMap<String, String>();
row.put("id", id);
row.put("name", name);
row.put("parent", parentId);
return row;
}
}
Assuming that you know that the root elements are zero, here's the pseudocode to output to text:
function PrintLevel (int curr, int level)
//print the indents
for (i=1; i<=level; i++)
print a tab
print curr \n;
for each child in the table with a parent of curr
PrintLevel (child, level+1)
for each elementID where the parentid is zero
PrintLevel(elementID, 0)
You can emulate any other data structure with a hashmap, so that's not a terrible limitation. Scanning from the top to the bottom, you create a hashmap for each row of the database, with an entry for each column. Add each of these hashmaps to a "master" hashmap, keyed on the id. If any node has a "parent" that you haven't seen yet, create an placeholder entry for it in the master hashmap, and fill it in when you see the actual node.
To print it out, do a simple depth-first pass through the data, keeping track of indent level along the way. You can make this easier by keeping a "children" entry for each row, and populating it as you scan the data.
As for whether there's a "better" way to store a tree in a database, that depends on how you're going to use the data. I've seen systems that had a known maximum depth that used a different table for each level in the hierarchy. That makes a lot of sense if the levels in the tree aren't quite equivalent after all (top level categories being different than the leaves).
If nested hash maps or arrays can be created, then I can simply go down the table from the beginning and add each item to the nested array. I must trace each line to the root node in order to know which level in the nested array to insert into. I can employ memoization so that I do not need to look up the same parent over and over again.
Edit: I would read the entire table into an array first, so it will not query the DB repeatedly. Of course this won't be practical if your table is very large.
After the structure is built, I must do a depth first traverse through it and print out the HTML.
There's no better fundamental way to store this information using one table (I could be wrong though ;), and would love to see a better solution ). However, if you create a scheme to employ dynamically created db tables, then you opened up a whole new world at the sacrifice of simplicity, and the risk of SQL hell ;).
To Extend Bill's SQL solution you can basically do the same using a flat array. Further more if your strings all have the same lenght and your maximum number of children are known (say in a binary tree) you can do it using a single string (character array). If you have arbitrary number of children this complicates things a bit... I would have to check my old notes to see what can be done.
Then, sacrificing a bit of memory, especially if your tree is sparse and/or unballanced, you can, with a bit of index math, access all the strings randomly by storing your tree, width first in the array like so (for a binary tree):
String[] nodeArray = [L0root, L1child1, L1child2, L2Child1, L2Child2, L2Child3, L2Child4] ...
yo know your string length, you know it
I'm at work now so cannot spend much time on it but with interest I can fetch a bit of code to do this.
We use to do it to search in binary trees made of DNA codons, a process built the tree, then we flattened it to search text patterns and when found, though index math (revers from above) we get the node back... very fast and efficient, tough our tree rarely had empty nodes, but we could searh gigabytes of data in a jiffy.
Pre-order transversal with on-the-fly path enumeration on adjacency representation
Nested sets from:
Konchog https://stackoverflow.com/a/42781302/895245
Jonny Buchanan https://stackoverflow.com/a/194031/895245
is the only efficient way I've seen of traversing, at the cost of slower updates. That's likely what most people will want for pre-order.
Closure table from https://stackoverflow.com/a/192462/895245 is interesting, but I don't see how to enforce pre-order there: MySQL Closure Table hierarchical database - How to pull information out in the correct order
Mostly for fun, here's a method that recursively calculates the 1.3.2.5. prefixes on the fly and sorts by them at the end, based only on the parent ID/child index representation.
Upsides:
updates only need to update the indexes of each sibling
Downsides:
n^2 memory usage worst case for a super deep tree. This could be quite serious, which is why I say this method is likely mostly for fun only. But maybe there is some ultra high update case where someone would want to use it? Who knows
recursive queries, so reads are going to be less efficient than nested sets
Create and populate table:
CREATE TABLE "ParentIndexTree" (
"id" INTEGER PRIMARY KEY,
"parentId" INTEGER,
"childIndex" INTEGER NOT NULL,
"value" INTEGER NOT NULL,
"name" TEXT NOT NULL,
FOREIGN KEY ("parentId") REFERENCES "ParentIndexTree"(id)
)
;
INSERT INTO "ParentIndexTree" VALUES
(0, NULL, 0, 1, 'one' ),
(1, 0, 0, 2, 'two' ),
(2, 0, 1, 3, 'three'),
(3, 1, 0, 4, 'four' ),
(4, 1, 1, 5, 'five' )
;
Represented tree:
1
/ \
2 3
/ \
4 5
Then for a DBMS with arrays like PostgreSQL](https://www.postgresql.org/docs/14/arrays.html):
WITH RECURSIVE "TreeSearch" (
"id",
"parentId",
"childIndex",
"value",
"name",
"prefix"
) AS (
SELECT
"id",
"parentId",
"childIndex",
"value",
"name",
array[0]
FROM "ParentIndexTree"
WHERE "parentId" IS NULL
UNION ALL
SELECT
"child"."id",
"child"."parentId",
"child"."childIndex",
"child"."value",
"child"."name",
array_append("parent"."prefix", "child"."childIndex")
FROM "ParentIndexTree" AS "child"
JOIN "TreeSearch" AS "parent"
ON "child"."parentId" = "parent"."id"
)
SELECT * FROM "TreeSearch"
ORDER BY "prefix"
;
This creates on the fly prefixes of form:
1 -> 0
2 -> 0, 0
3 -> 0, 1
4 -> 0, 0, 0
5 -> 0, 0, 1
and then PostgreSQL then sorts by the arrays alphabetically as:
1 -> 0
2 -> 0, 0
4 -> 0, 0, 0
5 -> 0, 0, 1
3 -> 0, 1
which is the pre-order result that we want.
For a DBMS without arrays like SQLite, you can hack by encoding the prefix with a string of fixed width integers. Binary would be ideal, but I couldn't find out how, so hex would work. This of course means you will have to select a maximum depth that will fit in the number of bytes selected, e.g. below I choose 6 allowing for a maximum of 16^6 children per node.
WITH RECURSIVE "TreeSearch" (
"id",
"parentId",
"childIndex",
"value",
"name",
"prefix"
) AS (
SELECT
"id",
"parentId",
"childIndex",
"value",
"name",
'000000'
FROM "ParentIndexTree"
WHERE "parentId" IS NULL
UNION ALL
SELECT
"child"."id",
"child"."parentId",
"child"."childIndex",
"child"."value",
"child"."name",
"parent"."prefix" || printf('%06x', "child"."childIndex")
FROM "ParentIndexTree" AS "child"
JOIN "TreeSearch" AS "parent"
ON "child"."parentId" = "parent"."id"
)
SELECT * FROM "TreeSearch"
ORDER BY "prefix"
;
Some nested set notes
Here are a few points which confused me a bit after looking at the other nested set answers.
Jonny Buchanan shows his nested set setup as:
__________________________________________________________________________
| Root 1 |
| ________________________________ ________________________________ |
| | Child 1.1 | | Child 1.2 | |
| | ___________ ___________ | | ___________ ___________ | |
| | | C 1.1.1 | | C 1.1.2 | | | | C 1.2.1 | | C 1.2.2 | | |
1 2 3___________4 5___________6 7 8 9___________10 11__________12 13 14
| |________________________________| |________________________________| |
|__________________________________________________________________________|
which made me wonder why not just use the simpler looking:
__________________________________________________________________________
| Root 1 |
| ________________________________ _______________________________ |
| | Child 1.1 | | Child 1.2 | |
| | ___________ ___________ | | ___________ ___________ | |
| | | C 1.1.1 | | C 1.1.2 | | | | C 1.2.1 | | C 1.2.2 | | |
1 2 3___________| 4___________| | 5 6___________| 7___________| | |
| |________________________________| |_______________________________| |
|_________________________________________________________________________|
which does not have an extra number for each endpoint.
But then when I actually tried to implement it, I noticed that it was hard/impossible to implement the update queries like that, unless I had parent information as used by Konchog. The problem is that it was hard/impossible to distinguish between a sibling and a parent in one case while the tree was being moved around, and I needed that to decide if I was going to reduce the right hand side or not while closing a gap.
Left/size vs left/right: you could store it either way in the database, but I think left/right can be more efficient as you can index the DB with a multicolumn index (left, right) which can then be used to speed up ancestor queries, which are of type:
left < curLeft AND right > curLeft
Tested on Ubuntu 22.04, PostgreSQL 14.5, SQLite 3.34.0.
If elements are in tree order, as shown in your example, you can use something like the following Python example:
delimiter = '.'
stack = []
for item in items:
while stack and not item.startswith(stack[-1]+delimiter):
print "</div>"
stack.pop()
print "<div>"
print item
stack.append(item)
What this does is maintain a stack representing the current position in the tree. For each element in the table, it pops stack elements (closing the matching divs) until it finds the parent of the current item. Then it outputs the start of that node and pushes it to the stack.
If you want to output the tree using indenting rather than nested elements, you can simply skip the print statements to print the divs, and print a number of spaces equal to some multiple of the size of the stack before each item. For example, in Python:
print " " * len(stack)
You could also easily use this method to construct a set of nested lists or dictionaries.
Edit: I see from your clarification that the names were not intended to be node paths. That suggests an alternate approach:
idx = {}
idx[0] = []
for node in results:
child_list = []
idx[node.Id] = child_list
idx[node.ParentId].append((node, child_list))
This constructs a tree of arrays of tuples(!). idx[0] represents the root(s) of the tree. Each element in an array is a 2-tuple consisting of the node itself and a list of all its children. Once constructed, you can hold on to idx[0] and discard idx, unless you want to access nodes by their ID.
Think about using nosql tools like neo4j for hierarchial structures.
e.g a networked application like linkedin uses couchbase (another nosql solution)
But use nosql only for data-mart level queries and not to store / maintain transactions

Build a Category tree with a php recursion

I have a MySQL table with categories whic look like:
categoryID | categoryName | parentID
------------------------------------
1 | books | NULL
------------------------------------
2 | newspapers | NULL
------------------------------------
3 | sci-fi | 1
------------------------------------
4 | robot stories | 3
-------------------------------------
etc.
I need to build a category tree with recursion when I have only the ID of 'robot stories' and it has to look like:
books -> sci-fi -> robot stories
Any advise will be helpful!
If the tree is not too big, I would just load the whole thing in memory (you can cache it too):
$tree = [];
$stmt = $db->query("SELECT * FROM categories");
while (($row = $stmt->fetch(PDO::FETCH_ASSOC)) !== false) {
$tree[$row['categoryID']] = $row;
}
$currentCategoryId = 4;
$hierarchy = [];
// build hierarchy, working from leaf to root
while (isset($tree[$currentCategoryId])) {
array_unshift($hierarchy, $tree[$currentCategoryId]);
$currentCategoryId = $tree[$currentCategoryId]['parentId'];
}
print_r($hierarchy);

SQL Query and PHP manipulation with Nested Set Model

I was reading this article, http://mikehillyer.com/articles/managing-hierarchical-data-in-mysql/.
I wanted to give a simple example and then ask you how do I get the desired result? So here is the example:
+---------+-----------------------------+
| product_id | product_name |
+---------+-----------------------------+
| 1 | Example Product |
+---------+-----------------------------+
+---------+-----------------------------+
| product_id | category_id |
+---------+-----------------------------+
| 1 | 2 |
| 1 | 4 |
+---------+-----------------------------+
+-------------+--------------------+------+------+
| category_id | name | lft | rgt |
+-------------+--------------------+------+------+
| 1 | Electronics | 1 | 8 |
| 2 | Televisions | 2 | 3 |
| 3 | Portable Electronics | 4 | 7 |
| 4 | CD Players | 5 | 6 |
+-------------+--------------------+------+------+
I want to be able to display the following result in HTML after querying and then manipulating the data in PHP:
"Example Product" Categories:
Electronics
Televisions
Portable Electronics
CD Players
Can you help walk me through the query and manipulation in PHP to achieve this result?
Some specifics to think about:
Notice how both categories are under Electronics, but "Electronics" appears only once here, displaying each of the subcategories it belongs to below
The result should eventually be a PHP multi-dimensional array with the category containing an array of sub-categories and each sub-category containing an array of sub-subcategories if they exist.
I imagine printing the depth will be very important for constructing the right tree in HTML.
I thought this was a nice challenge .. here's my solution:
Basically: read a node, then all following nodes with a rgt smaller than your rgt are your children, do this recursively.
I've used a peek/consume to read from mysql like you normally would.
The script will break or loop if the query gives no results, or if the data-set is broken.
class NestedNodeReader {
private $mysql_result;
private $peeked = false;
private $last_peek;
public function __construct($mysql_result) {
$this->mysql_result = $mysql_result;
}
public function getTree() {
$root = $this->consume();
$root["children"] = $this->getSubTree($root["rgt"]);
return $root;
}
private function getSubTree($stop_at) {
$nodes = array();
$node = $this->peek();
while ($node["rgt"] < $stop_at) {
$node = $this->consume();
$node["children"] = $this->getSubTree($node["rgt"]);
$nodes[] = $node;
$node = $this->peek();
if (false === $node) {
break;
}
}
return $nodes;
}
private function peek() {
if (false === $this->peeked) {
$this->peeked = true;
$this->last_peek = mysql_fetch_assoc($this->mysql_result);
}
return $this->last_peek;
}
private function consume() {
if (false === $this->peeked) {
return mysql_fetch_assoc($this->mysql_result);
} else {
$this->peeked = false;
return $this->last_peek;
}
}
}
$query = "SELECT node.name, node.lft, node.rgt
FROM nested_category AS node,
nested_category AS parent
WHERE node.lft BETWEEN parent.lft AND parent.rgt
AND parent.name = 'ELECTRONICS'
ORDER BY node.lft;"
$mysql_result = mysql_query($query);
$nnr = new NestedNodeReader($mysql_result);
print_r($nnr->getTree());

php / Mysql best tree structure

I have to build a tree that will contain about 300 nodes inside it. The tree has no depth limitations. So it can have 3 or 15 levels. Each node can have an unlimited number of children.
The priority is to get a complete tree / subtree the faster as possible, but I also need to add nodes or move nodes sometimes but not that often.
I want to know the best way to store the tree in the database and the best way to retrieve the data, if possible, in php.
You can use a Nested Set Model as it yields very efficient queries. Check out Managing Hierarchical Data in MySQL and read the section called Nested Set Model.
If you're using an ORM like Doctrine, it includes nested set capabilities.
It can be difficult for some to grasp the nested set concepts of left and right. I have found that using those numbers as an analogy for the line numbers of open/close tags in an XML document, folks find it easier to grasp.
For instance, take the data example from the MySQL link above:
+-------------+----------------------+-----+-----+
| category_id | name | lft | rgt |
+-------------+----------------------+-----+-----+
| 1 | ELECTRONICS | 1 | 20 |
| 2 | TELEVISIONS | 2 | 9 |
| 3 | TUBE | 3 | 4 |
| 4 | LCD | 5 | 6 |
| 5 | PLASMA | 7 | 8 |
| 6 | PORTABLE ELECTRONICS | 10 | 19 |
| 7 | MP3 PLAYERS | 11 | 14 |
| 8 | FLASH | 12 | 13 |
| 9 | CD PLAYERS | 15 | 16 |
| 10 | 2 WAY RADIOS | 17 | 18 |
+-------------+----------------------+-----+-----+
If you take the lft, rgt fields and use them as line numbers for an XML document, you get:
1. <electronics>
2. <televisions>
3. <tube>
4. </tube>
5. <lcd>
6. </lcd>
7. <plasma>
8. </plasma>
9. </televisions>
10. <portable electronics>
11. <mp3 players>
12. <flash>
13. </flash>
14. </mp3 players>
15. <cd players>
16. </cd players>
17. <2 way radios>
18. </2 way radios>
19. </portable electronics>
20. </electronics>
Seeing it this way can make it much easier for some to visualize the resulting nested set hierarchy. It also makes it clearer why this approach improves efficiency as it makes it possible to select entire nodes without the need for multiple queries or joins.
This is great article about it: Managing Hierarchical Data in MySQL. I used for a long time.
If you have some mathematical capabilities, you can really understand why it is so great!
<?php
$host = "localhost";
//Database user name.
$login = "root";
//Database Password.
$dbpass = "";
$dbname = "abc";
$PDO = new PDO("mysql:host=localhost;dbname=$dbname", "$login", "$dbpass");
$rows = array();
$sql = 'SELECT id, parent_id, name FROM employee';
$query = $PDO->prepare($sql);
$query->execute();
$rows = array();
if (!$query)
{
$error = 'Error fetching page structure, for nav menu generation.';
exit();
}
while($row = $query->fetch(PDO::FETCH_ASSOC)){
if( strcasecmp($row['parent_id'],'null') === 0 || empty($row['parent_id']) ) {
$row['parent_id'] = null;
}
$rows[] = $row;
}
// covert raw result set to tree
$menu = convertAdjacencyListToTree(null,$rows,'id','parent_id','links');
// echo '<pre>',print_r($menu),'</pre>';
// display menu
echo themeMenu($menu,1);
/*
* ------------------------------------------------------------------------------------
* Utility functions
* ------------------------------------------------------------------------------------
*/
/*
* Convert adjacency list to hierarchical tree
*
* #param value of root level parent most likely null or 0
* #param array result
* #param str name of primary key column
* #param str name of parent_id column - most likely parent_id
* #param str name of index that children will reside ie. children, etc
* #return array tree
*/
function convertAdjacencyListToTree($intParentId,&$arrRows,$strIdField,$strParentsIdField,$strNameResolution) {
$arrChildren = array();
for($i=0;$i<count($arrRows);$i++) {
if($intParentId === $arrRows[$i][$strParentsIdField]) {
$arrChildren = array_merge($arrChildren,array_splice($arrRows,$i--,1));
}
}
$intChildren = count($arrChildren);
if($intChildren != 0) {
for($i=0;$i<$intChildren;$i++) {
$arrChildren[$i][$strNameResolution] = convertAdjacencyListToTree($arrChildren[$i][$strIdField],$arrRows,$strIdField,$strParentsIdField,$strNameResolution);
}
}
return $arrChildren;
}
/*
* Theme menu
*
* #param array menu
* #param runner (depth)
* #return str themed menu
*/
function themeMenu($menu,$runner) {
$out = '';
if(empty($menu)) {
return $out;
}
$out.='<ul>';
foreach($menu as $link) {
$out.= sprintf(
'<li class="depth-%u">%s%s</li>'
,$runner
,$link['name']
,themeMenu($link['links'],($runner+1))
);
}
$out.='</ul>';
return $out;
}
?>

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